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Protocols

CLSM

Here are some PDFs that are useful.


LSM710 Quick Guide


Zen software LSM 710 chapter 4 only PDF.
Zen LSM 710 entire guide. PDF Please note: Although the guide contains information about the ConfoCor system, this LSM 710 is not equipped with a ConfoCor.


How to turn on and off the system


Notes to Zen 2008 and the microscope


You can download the ZEN LE 2008 image veiwer to analyze data on your own computer. It has the basic analyses tools only.

Important Note: Before installing ZEN 2008 LE onto an offline workstation/computer, please use the Windows Uninstaller to uninstall all previous versions of ZEN 2007 LE. Please be sure to not install the ZEN 2008 LE onto an already running confocal hardware system with ZEN 2007 or ZEN 2008. ZEN 2008 LE is meant to be used on offline workstations/computers only.
If using Windows-based user accounts, please be sure to right-click on the installed ZEN 2008 LE folder and give all users the permission rights to "read", "write", and "modify" under that folder.


For full analysis tools, the Zeiss Imaging Workstation is available.

Here are some additional PDFs from Zeiss that you may find useful.

CLSM Methods

CLSM Principles

Microscopy basics

Intavis InSitu Pro VS preparative robot

Intavis quick guide to using the robot can be downloaded here. PDF
Intavis complete guide can be downloaded here. PDF
Intavis method template can be downloaded here so that you can design your own protocols. PDF
Intavis user protocol: Arabidopsis whole mount immunohistochemistry PDF
Intavis user protocol: Arabidopsis slides in situ hybridization PDF


Additional Intavis protocols are available on their website. http://www.intavis.com/en/In_Situ_Detection/InsituPro_VSi/index.php

In order to access the protocols, first create a login account. Then go to customer support. PDFs, user protocols and templates examples can be found on the website.

Nikon Eclipse 800

This epifluorescence microscope can be used for pre-screening samples before CLSM imaging as well as for imaging samples. PDF

It is currently equipped with a Spot-2 camera.

Spot-2 camera

The SPOT-2 is a digital CCD camera with a dual position color filter providing both color and monochrome images. This system has Auto Exposure and White Balance. PDF